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Guesthouse vacation rentals in San Juan

Find and book unique guesthouse rentals on Airbnb

Top-rated guesthouse rentals in San Juan

Guests agree: these guesthouse rentals are highly rated for location, cleanliness, and more.

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A compact room features a black wooden bunk bed with a spacious lower sleeping area and an upper sleeping space, both adorned with white bedding. A sturdy ladder provides access to the top bunk, while a circular light fixture adds illumination to the minimalist decor.
Guesthouse in Caticugan

Palaruan Stays with Generator and Water Tank

At Palaruan Stays, we have back up GENERATOR and WATER TANK and we are 5-10 minute away from the beach so you could enjoy the sand anytime. You are beside our home grown restaurant here in Siquijor, Siquijor so you could enjoy our tasty Crispy Lechon and Buffalo Wings all day! Additionally, we are infront of Siquijor Provincial Hospital so you have the best medical access if needed anytime in the island. We are also beside pharmacies that are open until 12mn so you can satisfy your cravings.

Top guest favorite
A serene outdoor space is highlighted by a large swimming pool, reflecting the vibrant colors of the sunset. Lush green landscapes surround the area, with native cottages in the background and seating arrangements positioned by the poolside.
Guesthouse in San Juan
4.98 out of 5 average rating, 65 reviews

Paliton heights resort Emerald room top level

We are an OVER LOOKING RESORT, capturing the most amazing sunset, ocean and island views! 🌅 We are around 2-3 mins from the highway of Barangay Paliton San Juan. We are not on the beach❗️ Our ambiance is PEACEFUL, quite and Tranquil 🫶🏻🌅Far enough from noisy busy night life at night but close enough to get to join them.Minutes away from many Restaurants, Paliton beach and many more activities. If a few minutes a way bothers you or inconvenience you then our Beautiful place is not for you

Guest favorite
The cozy guest house is showcased from the outside, featuring a two-story structure with a spacious balcony. Lush greenery surrounds the building, and wooden doors invite guests inside. A pathway with stone circles leads to the entry, emphasizing a blend of nature and architecture.
Guesthouse in San Juan
4.93 out of 5 average rating, 73 reviews

Alyscha 2 - Cozy Beach Retreat (Lower Studio)

Escape to your tropical retreat! Stay in the lower unit of our cozy guest house, complete with your own kitchen and bathroom, just steps from a white sand beach and stunning sunsets. Surrounded by lush gardens and swaying palms, this serene hideaway offers the perfect blend of relaxation and adventure. Unwind in the peaceful ambiance, then stroll to nearby restaurants or explore the island's attractions. With private beach access, it's your perfect getaway!

Guesthouse in Tubod
New place to stay

Isla Cove Guesthouse

Welcome to Isla Cove Guesthouse, your cozy retreat in Tubod, San Juan, Siquijor. Perfectly located near Coco Grove Resort and just steps away from the famous Tubod Marine Sanctuary, our guesthouse offers the ideal spot for travelers who want to relax, snorkel, and explore the island’s natural beauty. Whether you’re here for the crystal-clear waters, breathtaking sunsets, or the laid-back Siquijor vibe, Isla Cove Guesthouse is your home away from home.

Superhost
A cozy guest room features a spacious bed, complemented by soft linens and nestled between two windows covered by dark green blackout curtains. Floating shelves are mounted beside the bed, displaying minimalist decor. Ceiling lights provide even illumination, creating a calm, restful ambiance.
Guesthouse in Pasihagon
4.67 out of 5 average rating, 6 reviews

Palm Haven with Starlink

Tropical, one bedroom guest house with balcony. Part of 3 guesthouses Tucked away in the heart of palm fringed garden. This guest house is a serene retreat, surrounded by my greenery, providing the perfect hideaway to rest and relax after a whole day of fun in the sun, exploring the wonderful island of Siquijor. Enjoy your morning coffee out on your breezy lush garden balcony. Comfortable bedroom, thoughtfully furnished.

Top guest favorite
Guesthouse in Maite
5 out of 5 average rating, 6 reviews

SeaLaVie Deluxe – Beachfront Paradise & Sunset

Welcome to our newest Airbnb listing — a more spacious upgrade from our original listings! You’ll be surrounded by soft white sand, golden coconut trees all around. You can enjoy beautiful sunsets over the ocean—it’s like a gorgeous painting! Enjoy extra space, added comfort, and the same island charm our guests love.

A bright room features a spacious bed with teal pillows, flanked by a decorative coverlet. In one corner, a small dining table with two chairs sits next to an intricately patterned fabric. An air conditioning unit is mounted on the wall, enhancing comfort.
Guesthouse in Tubod
4.43 out of 5 average rating, 14 reviews

Fuego Guest House 2

This unit is brand new built and just finished construction on January 2019. Featuring queen size bed with a beautiful wood tiles through out the unit and a porch. The bathroom feature vanity with marble sink and a big walk in shower. This unit also has air condition and hot water heater.

Superhost
Guesthouse in San Juan

Stay&Relax Guest House (R-Ivy)

Perfect location in the middle of San Juan and just across the white sand beach. Walking distance to bridge, carenderias and convenient stores. It is also peaceful which bring your stay a relaxed one , feeling that you are at home.

An exterior view showcases a second-level balcony with a modern railing, framed by lush greenery. The building design features clean lines and a light color palette, blending with the natural surroundings.
Guesthouse in Tambisan

Deluxe Room B- Top Right

Adayo Cove Resort is the ideal combination of a peaceful, tranquil location on the ocean in a quiet barangay, but also only a few minutes by tricycle or motorbike to the busy tourist zone. Truly the best of both worlds!

Guest favorite
Guesthouse in San Juan
4.94 out of 5 average rating, 31 reviews

Room liberty, studio type+Generator+starlink WFH

peaceful and spacious place to stay for the whole family, sofa can be converted into bed, own kitchen with utensils. With a generator stand by incase of power outages. Powered with starlink.

Guesthouse in San Juan
4.57 out of 5 average rating, 7 reviews

Affordable Guesthouse @ San Juan

Affordable basic aircon room located at the heart of San Juan Siquijor where you can easily access all major tourist spots, bar, restaurant and a walking distance from the beach.

A wooden entrance sign welcomes guests to Monera's Native Beach. The structure features blue and white walls, surrounded by palm trees and local vegetation. A sandy path leads from the gate to the beach, with clear skies visible above, hinting at a sunny day.
Guesthouse in Tubod

Monera's Native Beach House

Have fun with the whole family at this stylish place. Ocean swimming Kayaking Karaoke singing sunset viewing.

Popular amenities for San Juan guesthouse rentals

Kitchen
Wifi
Pool
Free parking on premises
Air conditioning

Family-friendly guest house rentals

A spacious room features two beds positioned side by side, each made with simple linens. A colorful map of Siquijor is displayed on the wall. Natural light enters through a window above one bed, and a closet is set against the opposite wall.
Private room in San Juan

Loti's Guesthouse

Private room in San Juan
New place to stay

Ocean Front Room for 2+1

A bright sleeping area features two spacious beds with neatly arranged linens. Natural light enters through large windows, highlighting the tiled floor. A doorway leads to a grassy outdoor space, with a small seating area visible just outside.
Private room in San Juan

Room Good for 4 person

A room features a set of wooden bunk beds, with mattresses and neutral bedding arranged on each level. Natural light filters in through white curtains, illuminating the space. The ceiling is adorned with two overhead lights, enhancing the brightness of the interior.
Private room in Tambisan
5 out of 5 average rating, 3 reviews

Newly Built Room 1 good for 10 person.

Private room in Tubod
New place to stay

Double Room by The House - Siquijor

The entrance to the guest house features a glass door with the name 'Seafront Guest House' elegantly displayed. Colorful balloons can be seen to the left, creating a festive atmosphere. Reflections of greenery and nearby plants are visible in the glass door.
Private room in Siquijor
4.67 out of 5 average rating, 18 reviews

Cozy Sea View Balcony Getaway

Private room in San Juan
New place to stay

Eshan Residence

A rustic cabin is illuminated at night by warm lights on its exterior. A small fire pit is situated in the foreground, casting a soft glow. Several people are seen gathered outside, creating a communal setting amid surrounding greenery.
Private room in San Juan

It's a bungalow with outdoor cr.

Guest house rentals with a patio

Private room in Tag-ibo
New place to stay

Cliff Garden: Cottage 1 - AC, Starlink WiFi, 2 pax

An exterior view features a covered porch adorned with traditional bamboo patterns. A wooden bench is positioned beside potted plants, while large glass doors lead into the interior, framed by a neatly maintained lawn.
Guesthouse in Siquijor

seaview room with kitchen

Guest favorite
A modern two-story house is framed by lush greenery. The building features a spacious balcony with wooden railings above large glass doors, allowing natural light to illuminate the interior. A pathway leads through well-maintained landscaping, enhancing the home's inviting facade.
Private room in Siquijor
4.85 out of 5 average rating, 13 reviews

Immanuel inn

Guest favorite
A modern two-story building is seen from an angled perspective, revealing its balconies and large windows. A gravel pathway leads toward the beach, with palm trees and lush vegetation lining the sides. The sky is bright blue, dotted with a few clouds.
Private room in Maite
5 out of 5 average rating, 11 reviews

San Juan Beach Resort

The sleeping area features two spacious beds, dressed in soft pink linens, positioned against a light-colored wall. Each bed is accompanied by rolled towels and a small side table. Decorative leaf-shaped wall art enhances the simple decor, and an air conditioning unit is visible.
Private room in Tubod
4.32 out of 5 average rating, 19 reviews

Two beds Studio w/ Starlink, AC and Private bath

A sleeping area is presented with a spacious bed dressed in gray and red linens. A wooden headboard is complemented by bedside lamps. A minimalist bench sits alongside the bed, with light-colored walls and modern flooring enhancing the tranquil ambiance.
Guesthouse in Tambisan

The Lofts Siquijor 2

A sunlit corner room is framed by elegant arched windows, offering expansive views of the ocean. The soft neutral walls complement the scenic backdrop, while the tiled floor reflects natural light. This space provides a serene atmosphere, perfect for relaxation.
Private room in Siquijor
4.33 out of 5 average rating, 9 reviews

Ocean Suite Room 8

A charming yellow house is framed by vibrant garden flowers and lush greenery. The entrance features a welcoming porch, with large windows that allow natural light to fill the inviting interior. Nearby tropical plants create a tranquil, nature-infused atmosphere.
Private room in Tubod

Chekesh House

Guest house rentals with a washer and dryer

Guesthouse in Maria

Blue Haven with beach view and sunsets

Guest favorite
A warm and inviting bedroom features a high bamboo ceiling with woven patterns. Natural light floods the space through large windows adorned with soft curtains. A wooden bed sits centrally, accompanied by a small table and a standing fan, with decorative elements on the walls.
Private room in Siquijor
4.94 out of 5 average rating, 33 reviews

Premium bungalow with shared bathroom

Guest favorite
An outdoor seating area features a small round table accompanied by two wooden chairs. Smooth tiled flooring is visible, and a glass railing provides a safe barrier. Large windows allow natural light to enter the adjacent room, enhancing the open and inviting design.
Private room in Tubod
4.85 out of 5 average rating, 67 reviews

Chery's Guesthouse

A clean pool reflects the sky amidst a green garden setting, surrounded by well-maintained plants. The exterior features large glass doors leading into the living space, complemented by a shaded seating area. Nearby, a traditional hut adds a rustic touch to the landscape.
Guesthouse in Dumaguete
4.92 out of 5 average rating, 13 reviews

Bigler's Private Resort Unit 2

A sandy beach extends towards the water, with calm waves lapping the shore. Palm trees provide shade, and a few fishing boats are anchored nearby. Two white chairs are positioned on the sand, inviting relaxation while enjoying the tranquil atmosphere.
Private room in Tubod
4.67 out of 5 average rating, 9 reviews

Lapyahan Guesthouse Room 3

A serene beach scene features gentle blue waters meeting a sandy shore. Small boats are anchored nearby, while palm fronds offer tranquil shade. The sky is filled with soft clouds, creating a peaceful coastal atmosphere.
Private room in San Juan
4.68 out of 5 average rating, 40 reviews

Lapyahan Guesthouse(Aircon room)

When is the best time to visit San Juan?

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Quick stats about guesthouse rentals in San Juan

  • Total vacation rentals

    Explore 80 vacation rentals in San Juan

  • Verified guest reviews

    Over 1,080 verified reviews to help you choose

  • Pet-friendly vacation rentals

    Find 20 rentals that welcome pets

  • Vacation rentals with a pool

    10 properties feature pools

  • Rentals with dedicated workspaces

    30 properties have a dedicated workspace

  • Wi-Fi availability

    70 of San Juan vacation rentals include wi-fi access

  • Popular amenities for guests

    Guests love Kitchen, Wifi, and Pool across San Juan rentals

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