Hotel vacation rentals in San Juan County

Find and book unique hotel rentals on Airbnb

Top-rated hotel rentals in San Juan County

Guests agree: these hotel rentals are highly rated for location, cleanliness, and more.

%{current} / %{total}1 / 1
Guest favorite
A modern guesthouse features a sloped roof and wooden exterior, set against a backdrop of tall evergreen trees. Large glass doors provide a view into the interior, blending harmoniously with the natural surroundings.
Hotel room in Friday Harbor
4.98 out of 5 average rating, 105 reviews

Private guesthouse immersed in nature

Your private guesthouse awaits at ~ Inn at Saltwater Farm ~ a modern, Scandinavian-style, boutique inn situated on 162 wild and beautiful acres just outside the town of Friday Harbor. Escape to your separate and private guesthouse with breathtaking views, modern amenities, and miles of trails, gardens, and natural beauty to explore. Private deck & floor-to-ceiling windows with a cozy & intimate woodsy view. Wheelchair accessible. KING bedroom + QUEEN loft + DOUBLE sleeper sofa + bathroom.

Hotel room in Eastsound
4.8 out of 5 average rating, 5 reviews

Bayside King Room with Stunning Island Views

✨ Wake up to the beauty of Orcas Island at Rosario Village. Our Bayside King Rooms feature partial ocean views overlooking the historic Moran Mansion or Rosario Marina, offering a serene retreat just minutes from Eastsound. ✔ 5 min to Moran State Park 🌲 ✔ Peaceful island setting 🌿 ✔ Balcony or patio w/ seating 🪴 ✔ Roku TV ✔ Smart lock – contactless entry 🔑 ✔ Free parking + EV charging Book your stay and experience the perfect balance of comfort, convenience, and island charm.

A cozy room features a wooden bunk bed with comfortable mattresses and a chair positioned by a large window. Natural light brightens the space, showcasing the earthy tones of the furnishings and the inviting view of greenery outside.
Hotel room in Friday Harbor
4.51 out of 5 average rating, 119 reviews

Wayfarers Guest House. Private, driftwood bunks #3

Thank you for finding the Wayfarers Rest, providing comfortable and convenient lodging for active travelers since 1999. Room 3 is a private room that can sleep up to 3, all linens provided. The common areas you will share with other guests (fully equipped kitchen, dining, living room and bathrooms) Wayfarers Rest is located just 4 blocks from the ferry terminal and two blocks from main St., easy walking. Free Wi-Fi, parking & chicken eggs. Pet friendly

Guest favorite
A two-story blue farmhouse is set against a grassy landscape, featuring a welcoming front porch adorned with decor. A stone pathway leads to the entrance, framed by shrubs and greenery. The sky is overcast, adding a serene backdrop to the rural setting.
Casa particular in Friday Harbor
4.98 out of 5 average rating, 44 reviews

Blue Horse Ranch / Private apartment with deck

You will be close to everything when you stay at this centrally-located farmhouse. Plenty of space and wide views, from the Olympic Mountains and False bay, to the San Juan Valley. Lots of farm animals and wildlife. 7 minutes from Town. We offer a private 735 Sq Ft Farmhouse apartment. It has two queen beds in the bedroom and queen sofa sleeper in the living room. We share the front porch, back deck is private. Kid and infant friendly. Lic#2000PROV104

Guest favorite
A well-appointed guest room is presented with a king sleigh bed positioned against a dark blue accent wall. Soft bedding complements the tranquil decor. A nightstand is included, along with a coffee station, enhancing the convenience for guests.
Hotel room in Lopez Island
4.88 out of 5 average rating, 51 reviews

~VintageLuxury~ SoakingTub Fireplace King Bed WiFi

✔ No Cleaning Fees ✔ Super Fast WIFI ✔ Fireplace ✔ Full Bathroom w. Soaking Tub ✔ In Room Coffee + Decaf & Tea ✔ Leather couch + King Sleigh Bed ✔ Access to All Common Spaces at Edenwild Boutique Hotel ✔ 24/7 Staff that are here when you need them and never when you don't :) ✔ TV Free Property- Bring your Tablet for Movies ✔ Free Parking Our commitment to you has made us TripAdvisors #1 Hotel in the San Juan Islands.

Top guest favorite
A vibrant sleeping area is highlighted by a spacious bed adorned with a colorful patterned blanket. The walls are painted in a deep hue, accented by wooden paneling. A cozy chair, a bedside lamp, and framed artwork complement the inviting atmosphere.
Hotel room in Friday Harbor
4.98 out of 5 average rating, 48 reviews

Cedar & Mandala two bedroom suite at Juniper Lane

Juniper Lane Guest House, a hip and unique boutique Inn on San Juan Island. This unique Friday Harbor accommodations is a custom crafted bold mosaic of exotic woods, tile, art, and color. Nestled on the edge of Friday Harbor overlooking Beaverton Valley it has a rural feel yet is still close to town. This Boutique Inn offers a variety of accommodations that are “brilliant and affordable” for everyone.

Guest favorite
A serene beach scene is captured under a clear blue sky. Two figures stroll along the shoreline, with gentle waves lapping at the sandy beach. Sunlight filters through nearby trees, casting a soft glow on the landscape. The atmosphere reflects tranquility and natural beauty.
Hotel room in Lopez Island
4.93 out of 5 average rating, 45 reviews

Romantic Island Hotel with Breathtaking Sunsets

✔ Super Fast WIFI ✔ In Room Coffee + Decaf & Tea ✔ Full Bathroom ✔ Private Covered Porch ✔ Access to All Common Spaces at Edenwild Boutique Hotel ✔ 24/7 that are here when you need them and never when you don't :) ✔ Walk to shops, restaurants, and beaches. The Edenwild is a 10 room Boutique Hotel that is Elegant as well as friendly. Your privacy and comfort is our top priority.

Superhost
A spacious bedroom features a wooden four-poster bed with neutral bedding, complemented by a cozy gray sofa. Soft lighting illuminates the walls, which are painted in a calming blue shade. A framed artwork hangs above the bed, adding a touch of color.
Hotel room in Lopez Island
4.91 out of 5 average rating, 107 reviews

•Sweet Island Hotel• Fireplace, Soaking Tub, WIFI

✔ Super Fast WIFI ✔ Fireplace ✔ In Room Coffee + Decaf & Tea ✔ Full Bathroom w. Soaking Tub ✔ 24/7 Staff That There When You Need Them and Never When You Don't :) ✔ Access to All Common Spaces at Edenwild Boutique Hotel ✔ Onsite Bicycle and Kayak rentals We think of every aspect of your stay, and our staff is always there when you need us and never when you don’t.

A charming red building is positioned near the waterfront, surrounded by lush green trees. A winding road leads up to the entrance, while a stone wall borders the shore. The scene is highlighted by the changing colors of autumn foliage in the background.
Hotel room in Eastsound

Kingfish Inn Pine Queen Suite

Our intimate 4 suite Inn includes four waterview suites, each uniquely furnished to provide gracious, unpretentious comfort. Just steps away from the sparkling waters of West Sound, the hiking trails of Turtleback Mountain, the bucolic farms of Crow Valley and the quaint shops of Eastsound.nt to leave this charming, one-of-a-kind place.

A 60-foot ketch is docked in the marina, displaying a rich green exterior with wooden accents. The clear blue sky reflects on the water, surrounded by various other boats. The boat's tall mast rises prominently, adding to its nautical charm.
Hotel room in Friday Harbor
4.76 out of 5 average rating, 103 reviews

Wharfside Boat n Breakfast Aft Room

Beautiful room on a 60 ft. Boat. Large Aft deck to enjoy being on the water. Low ceiling and a ladder-stairway to enter. Maximum of two guests. Room has half bath with pay showers available at top of dock. Towels provided. Full breakfast.

Superhost
The room features two spacious queen beds with crisp white linens, complemented by soft bedside lighting. A sliding glass door leads to a balcony, offering views of the outdoors. Drapes frame the door, enhancing the natural light that fills the space.
Hotel room in Eastsound
5 out of 5 average rating, 3 reviews

Secluded Orcas Island Getaway- Harborside 2452

Experience a peaceful Harborside escape with scenic views of Cascade Bay and the historic Moran Mansion. This comfortable waterfront stay offers a relaxing setting, perfect for unwinding and taking in the natural beauty of Orcas Island.

Superhost
A cluster of waterfront buildings is nestled among tall trees, overlooking serene waters. Each unit features a private balcony with wooden railings, inviting guests to enjoy the peaceful surroundings. Sunlight filters through the branches, casting soft shadows on the ground.
Hotel room in Eastsound
4.75 out of 5 average rating, 4 reviews

Secluded Orcas Island Getaway- Harborside 2363

Experience a peaceful Harborside escape with scenic views of Cascade Bay and the historic Moran Mansion. This comfortable waterfront stay offers a relaxing setting, perfect for unwinding and taking in the natural beauty of Orcas Island.

Popular amenities for San Juan County hotel rentals